MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Mammaliicoccus sciuri
19428wE1_BL01
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 24
bases: 2,837,491 bps
CDS: 2,819
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 59
misc RNA:
Total features: 2,888
Total number of protein coding genes annotated/found:
2,819
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Items 21 - 40
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5031|JADGMG010000007.1
SEQF5031_02859
Genome Viewer
NA
AA
1359/453
15139-16497
Bifunctional protein GlmU
SEQF5031|JADGMG010000007.1
SEQF5031_02860
Genome Viewer
NA
AA
993/331
16514-17506
Ribose-phosphate pyrophosphokinase
SEQF5031|JADGMG010000007.1
SEQF5031_02861
Genome Viewer
NA
AA
645/215
17637-18281
50S ribosomal protein L25
SEQF5031|JADGMG010000007.1
SEQF5031_02862
Genome Viewer
NA
AA
573/191
18403-18975
Peptidyl-tRNA hydrolase
SEQF5031|JADGMG010000007.1
SEQF5031_02863
Genome Viewer
NA
AA
3510/1170
18972-22481
Transcription-repair-coupling factor
SEQF5031|JADGMG010000007.1
SEQF5031_02864
Genome Viewer
NA
AA
1509/503
22468-23976
hypothetical protein
SEQF5031|JADGMG010000007.1
SEQF5031_02865
Genome Viewer
NA
AA
1167/389
23984-25150
hypothetical protein
SEQF5031|JADGMG010000007.1
SEQF5031_02866
Genome Viewer
NA
AA
267/89
25147-25413
hypothetical protein
SEQF5031|JADGMG010000007.1
SEQF5031_02867
Genome Viewer
NA
AA
384/128
25430-25813
Cell division protein DivIC
SEQF5031|JADGMG010000007.1
SEQF5031_02868
Genome Viewer
NA
AA
384/128
25897-26280
Polyribonucleotide nucleotidyltransferase
SEQF5031|JADGMG010000007.1
SEQF5031_02869
Genome Viewer
NA
AA
1281/427
26369-27649
tRNA(Ile)-lysidine synthase
SEQF5031|JADGMG010000007.1
SEQF5031_02870
Genome Viewer
NA
AA
537/179
27633-28169
Hypoxanthine-guanine phosphoribosyltransferase
SEQF5031|JADGMG010000007.1
SEQF5031_02871
Genome Viewer
NA
AA
2109/703
28262-30370
ATP-dependent zinc metalloprotease FtsH
SEQF5031|JADGMG010000007.1
SEQF5031_02872
Genome Viewer
NA
AA
879/293
30436-31314
33 kDa chaperonin
SEQF5031|JADGMG010000007.1
SEQF5031_02873
Genome Viewer
NA
AA
930/310
31411-32340
Cysteine synthase
SEQF5031|JADGMG010000007.1
SEQF5031_02874
Genome Viewer
NA
AA
792/264
32470-33261
Dihydropteroate synthase
SEQF5031|JADGMG010000007.1
SEQF5031_02875
Genome Viewer
NA
AA
360/120
33254-33613
Dihydroneopterin aldolase
SEQF5031|JADGMG010000007.1
SEQF5031_02876
Genome Viewer
NA
AA
489/163
33614-34102
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
SEQF5031|JADGMG010000007.1
SEQF5031_02877
Genome Viewer
NA
AA
1488/496
34159-35646
Lysine--tRNA ligase
SEQF5031|JADGMG010000003.1
SEQF5031_01802
Genome Viewer
NA
AA
216/72
2551-2336
hypothetical protein
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Items 21 - 40
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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